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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs1492242 chr6:119166338 C/T 0.000264 484 16.37 14.23 21.77 KM Plot
THCA rs1492243 chr6:119166040 A/G 0.000264 484 16.37 14.23 21.77 KM Plot
THCA rs149295334 chr6:24468354 G/A 0 483 16.57 14.78 8.88 KM Plot
THCA rs149330881 chr6:24475871 G/A 0 484 16.4 14.77 8.88 KM Plot
THCA rs149352844 chr10:81989464 CAAA/C 8.39E-5 483 16.2 15.87 9.77 KM Plot
THCA rs149380424 chr1:48788328 T/C 7.69E-5 489 17.83 14.78 14.78 KM Plot
THCA rs1494813 chr1:45957290 T/C 4.16E-5 488 10.4 16.18 16.97 KM Plot
THCA rs149625640 chr7:43972161 G/A 5.2E-5 473 16.33 13.65 17.03 KM Plot
THCA rs149733819 chr11:68195438 ATTTT/A 4.99E-7 482 21.33 17.83 15.68 KM Plot
THCA rs149756614 chr5:96311359 TA/T 3.52E-6 486 15.83 17.03 17.7 KM Plot
THCA rs149770035 chr6:24404474 CTT/C 4.77E-15 489 16.38 14.85 11.07 KM Plot
THCA rs149797111 chr10:81846546 G/A 0.000145 488 15.97 16.07 9.77 KM Plot
THCA rs149822716 chr12:109486538 CTG/C 6.88E-5 483 16.02 15.23 12.1 KM Plot
THCA rs149827202 chr7:16472584 G/A 0.000314 476 15.07 17.53 19.87 KM Plot
THCA rs149939833 chr6:24431163 T/TAATC 6.03E-7 480 16.3 14.9 9.25 KM Plot